eldix 4.2.0 - 10/09/2023

• gui.gui:
  • Clear image, STEM and thumbnails when loading new project
  • Change layout of toolbar on left hand side
  • Add LCD's for all motors and open the window to move motor when pushed
• STEM.gui:
  • When opening window to store coordinates, remove mouse actions. Enable when closing window.
  • Mapping: return to origin when completed
  • Mapping: store files in project directory + map/NN
  • Add menu option: Show text over STEM
  • Add some more useful colormap
• viewer.gui:
  • When a DIALS button is pushed twice, remove input window
• dials.all:
  • When running a programs step in DIALS, switch to Log area and switch back to input area when process is finished
• dials.fops:
  • Bug fix when selecting a lattice after indexing
• octagon.collect:
  • Increase tolerance for emission to +- 1.99
  • Change to diffraction mode with 10s delay
  • Disable STEM button wile changing ebeam mode
  • Change increment for Emission from 0.5 to 1.0
  • Modify last frame when changing end-phi or delta-phi instead of modifying end-phi

eldix 4.1.3 - 18/08/2023

• STEM.gui:
  • Bug fix: Swap options Find tip of pin/center of particle in STEM menu
• gui.projects:
  • Bug fix: scaling image

eldix 4.1.2 - 17/08/2023

• viewer.gui:
  • Refine center with option to select by point & click

eldix 4.1.1 - 15/08/2023

• gui.gui:
  • Set default directory to current project
• ebeam.gui:
  • Change layout of top 3 rows from place to grid
• STEM.gui:
  • Bug fix in routines for storing particles: needed to pass goniometer to class
  • Offsets: in text fields writes values to EBS
  • Offsets: "Go" writes values in text fields to EBS
  • Motor text fields: works as Move button
  • Make menu for FoV non-editable
  • Prealign: always enable Go button if previous operation has finished
  • Prealign: bug fix: always collect and evaluate 2 STEMs
  • Prealign: bug fix: wait ~ secs for results from stemfind before proceeding
  • Series: bug fix: switch to Image page when taking diffraction image
  • Disable buttons while transfer is in progress
• octagon.gui:
  • Motor text fields: works as Move button
• attocube.gui:
  • Motor text fields: works as Move button
• octagon.collect:
  • Disable Collect while transfer is in progress
• attocube.collect:
  • Disable Collect while transfer is in progress
• viewer.myimg:
  • Paint dashes as resolution rings and draw the text sowewhat lower

eldix 4.1.0 - 13/08/2023

• ebeam.cfg:
  • Add drift to cfg
• ebeam.ebeam:
  • Add method drift to Ebeam class

eldix 4.0.4 - 03/08/2023

• ebeam.gui:
  • Also update cfg['emission'] when changing it
  • Don't load beam center from ebeam.cfg
• fileio.fops:
  • always add beam_center to json and read from it

eldix 4.0.3 - 03/08/2023

• ebeam.gui:
  • Rename self.emission to self.emission_var and store value in self.emission

eldix 4.0.2 - 26/07/2023

• main:
  • Put initialization of logger into module mylog

eldix 4.0.1 - 20/07/2023

• cfg:
  • Add detector_id
• main:
  • Copy detector_id to eiger filewriter
• gui.gui:
  • For Attocube motor, don't use microdeg for phi but degrees in LCD
• ebeam.cfg:
  • Add 600 to FoV menu
• ebeam.gui:
  • Change self.emission to self.emmissionvar and make sure to not call self.emissionvar.get() from other thread
• attocube.cfg:
  • Add direction to motor dictionary
• attocube.cmdsrv:
  • Add echo to commands
• attocube.attocube:
  • Don't automatically de/activate motors on program exit/start
  • Convert nm and udeg from AMC into units given in cfg
  • Implement loop function in "move motor" command
• attocube.gui:
  • Don't divide motor values by 1000 or 1000000 but expect units to be treated in Attocube class
• STEM.gui:
  • Assume all motor units are handled in Attocube class
  • GONIO:X, SAMPLE:X and SAMPLE:Z corrections depend on directions Currently, movements are inverted with respect to SMARACT goniometer
  • Use params --sx/sz/--gx for stemfind when evaluating series
  • Adjust geometry of window to fit into FullHD height (1080 pixels)
  • Move Diffraction button into context menu
  • Fix calculation of number of STEM's in series
  • Make use of darkfield detectors when selected
  • Add GONIO:Z motors to motor fields

eldix 4.0.0 - 13/07/2023

• main:
  • Change authuserPolicy to authpolicy
  • Set default for imagelinewidth and imagepixelsize from cfg
• auth:
  • Change authuserPolicy to authpolicy
• cfg:
  • Change authuserPolicy to authpolicy
  • Add imagepixelsize
  • Add processdials/xds/automar/spotsize/drawspots/fulls/partials
• gui.users:
  • Change authuserPolicy to authpolicy
• gui.gui:
  • import gui.projects instead of gui.project
  • import viewer.myimg instead of gui.imgtk
  • import viewer.tools instead of gui.imgtools
  • import dials.fops
  • Adjust width of rimx = area with icons on left hand side
  • Change accelerators Right/Left/Up/Down to Alt+...
  • Add 'Show results in webbrowser' in Process menu
  • Import gui's for dials from dials directory
  • Leave things for xds and automar in directory process for now, but set processxds/automar=False by default. Use of xds/automar is deprecated
  • When reading and saving json for dials, use dials.fops not fileio.fops
  • Add prediction button to image tools icons
• gui.projects:
  • Renamed from gui.project (name already taken by other modules)
• viewer.gui:
  • Renamed from gui.image
• viewer.myimg:
  • All tools for image display not in gui.imgtk but in separate class Myimg
• octagon.collect:
  • Change layout of data collection settings, use grid instead of pack for correct alignment of checkbuttons
  • Add checkbutton 'Process data'
  • Add function to transfer data collection params to dials gui
• fileio.openimg:
  • Add magic number for dials.refl files and use type spot.refl
• fileio.dials:
  • Module to read .refl files using msgpack to uncompress
• fileio.fops:
  • Don't deal with i/o for dials but leave this to dials.fops
• common.utils:
  • Add methods vectorlength and vectorangles to deal with dials settings
  • Add methods real2cell: converts a,b,c,alpha,beta,gamma from realspace vectors
• common.defs:
  • Change MYCOLOR4 from 5fc3e7 to 6f94c4
  • Change MYCOLOR8 from b7e1f3 to d0ebf7
• common.appcommon:
  • Change default pixelsize to (0.075,0.075)
  • Add cfrm as current frame counter
• dials.tabs:
  • Setup of tabs for dials
• dials.setup/peaks/index/integrate/scale/export/predict:
  • GUI for individual steps in dials
• dials.fops:
  • I/O for dials command files and jsons
• everywhere:
  • Change MYCOLOR8 to MYCOLOR7

eldix 3.0.0 - 14/06/2023

• main:
  • Add support for attocube verride project directory
• cfg:
  • Add keyword attocube=true|false
  • Add resolution_rings to [image]
• gui.gui
  • Add support for attocube
• gui.imgtk
  • Draw discrete resolution rings
• gui.project
  • Prevent printing when project directory not given
  • Also apply scale to height when resizing
• gui.users
  • Also apply scale to height when resizing
• octagon.gui
  • Finish transfer: switch to project page
  • Finish transfer: add checkbutton to turn on HV
• ebeam.gui
  • Add field for current uAmp and trace changes of emission set by user
  • Save given value for emission in eldix.ebeam.json
• ebeam.cfg
  • Add keywords dx,dy,dz in [stem]
• STEM.gui
  • Add button Diffraction next to STEM
  • Apply configurable dx,dy,dz when moving goniometer to desired positions
• octagon.collect
  • Don't use actual current but emission set on Ebeam page
  • Update root template name with project name
  • When running a single diffraction image from STEM, don't update project

eldix 2.2.0 - 11/05/2023

• main:
  • Add option --project to override project directory
  • Ignore projects if project directory does not exist
• STEM.gui:
  • When beamblank=false, change deflector1xcurrent to 3 mA and set back to 0 when finished, but not on Offset page
  • Don't switch to diffraction mode when entering Offset
• gui.gui:
  • Turn video off before leaving program
  • Bug fix for imageviewer mode: set imagepage to 0, otherwise buttons will not work
• mardtb.collect:
  • Bug fix when calculating real exposure time
• mardtb.cfg:
  • Add option "gear" as maximum gear for exposure command

eldix 2.1.0 - 02/05/2023

• gui.gui:
  • Unmanage project frame when calling user frame
  • Bug fix: change user has to update project list
• gui.project:
  • Bug fix: add username to search tree for rebuilding
  • Bug fix: never disable rebuild projects button
    • Bug fix: get geometry from size of mainframe for resizing image
• gui.users: - Bug fix: get geometry from size of mainframe for resizing image
• octagon.collect:
  • Add field for current subset
  • Only edit frame range, not end angle
  • When shooting STEM after data collection, wait for PHI at end
  • Use a notebook to show Diffraction and STEM images in log area
• dectris.rest:
  • Bug fix: when aborting data collection reset number of images to number of images written
• STEM.gui:
  • Add option to fix max. color in STEM images
• auth:
  • Bug fix when using verbosity
• cfg:
  • Add keyword thumbnail=SIZE in section [global]

eldix 2.0.0 - 11/04/2023

• gui.gui:
  • Replace Authentication window by inline frame
  • Add a splash screen on startup
  • Bug fix for applying user roles: wrong call to role definitions
• gui.users:
  • Window for selecting user
• gui.imgtk:
  • Disable Refine center for non-ED data
• auth:
  • Bug fix: always define a default role at initialization
  • Bug fix: return from creating a hash when finding ERROR
• gui.auth:
  • Added GUI for authentication frame
• gui.project:
  • Added GUI for project management
• octagon.collect:
  • Add Project, and Description to Project frame
  • Open Projects when pushing Project button
  • Update projects at end of data collection

eldix 1.7.1 - 11/04/2023

• octagon.collect:
  • Bug fix: single image data collection would not end
• gui.gui:
  • Header window: make changes in x/y-center visible
• gui.imgtk:
  • When refining and drawing center, use x/y-center from Header window

eldix 1.7.0 - 28/03/2023

• octagon.collect:
  • Take STEM at end of data collection in separate thread so other tasks are not blocked (e.g. loading of images)
  • Show thumbnails of STEM and image
• STEM.gui:
  • Watch elapsed time when taking stems
  • When moving goniometer, don't drive motors simultaneously
  • Fix layout of toolbar on Debian, window was too high
  • When finishing series, always popup window to ask for manual pick
  • When choosing Yes or Cancel instead of Manual, shoot STEM at PHI=0
  • Show progress of series in message area right of Series button
  • On resizing window, reload STEM image to fit into new size
  • Right mouse button opens context menu, use Alt+Right for move xyz
    • Manually add meshes and particles to mapping
  • Create thumbnail to be displayed in Collect
• process.setup:
  • Bug fix: Delta-Chi was overwriting value for Chi in output files
• gui.gui:
  • Add Chi to Image Header and change color scheme of Image Header window
    • Change order of windows Image/Ebeam/Octagon/STEM/Collect to to Octagon/Ebeam/STEM/Collect/Image
    • Show image thumbnail in Collect, add options to File menu
    • Add thumbnail for Image & STEM to toolbar, but only for very large screen sizes (for now, rather show thumbnails in Collect)
• gui.peaks:
  • Bug fix in directBeam: method must always return 3 values
• gui.imgtk:
  • LoadImage: return after successfully loading spots file
    • Create image thumbnail for Collect
    • Fix geometries when resizing main window

eldix 1.6.3 - 16/03/2023

• octagon.collect:
  • Disable STEM, not Octagon during data collection
• fileio.fops:
  • dials.import: add geometry.goniometer.axis + fastslowbeamcentre
  • dials.refine: detector.fix=distance crystal.unitcell.forcestatic=true scanvarying=true
• process.index:
  • Get U-matrix from refine.log
  • Get refinement results from refined.expt, not refined.json
• common.utils:
  • Add Umat2Phi

eldix 1.6.2 - 13/03/2023

• gui.gui:
  • Bug fix when resizing window: appcommon.distro not appcommon.distr
• gui.imgtk:
  • Bug fix when drawing excluded areas and radii are empty
• fileio.fops:
  • Bug fix: in processing, catch exception when asking Osc instead of Phi
• process.index:
  • Bug fix when parsing cell from json
• process.scale:
  • Bug fix: define finished in init

eldix 1.6.1 - 07/03/2023

• main:
  • On Windows, use .ini, not cfg in logging
• dectris.eiger:
  • Catch exception when running eigerinit
• octagon.collect:
  • Bug fix: remove some debugging lines
• mardtb.mardtb:
  • Bug fix: send exposure command for still images!

eldix 1.6.0 - 07/03/2023

• octagon.octagon:
  • When PHI is still moving and another command to move PHI comes in, do not apply y-lookup to current position but relative to previous target
• octagon.collect:
  • Replace "PHI and delta-PHI" by "Phi range (start & end)"
  • Add line with "Delta-Phi/image"
• STEM.gui:
  • When pressing middle mouse button to shoot a diffraction image, check if the data directory exists!
    • Change button "Map" to "Show map" on Map subpage
  • Add message box next to Go button on Map page to monitor progress
• fileio.fops:
  • Write program version into eldix.json. Don't load json back when major or minor numbers differ, only releases ok.
  • Add 'Osc' to parameters for 'collect'
• cmdsrv:
  • Replace check for dettype == "eiger" by "eiger" in dettype
• cfg:
  • Change default detector_type from "eiger" to "eiger2r4m"
• detris.rest:
  • After finishing data collection, calculate time to wait for missing frames from transfer rates so far and add 10% but not less than 10 sec.
• mardtb.collect:
  • Get allowed frame rates from detector_type in cfg
    • Adjustments in geometry of widgets on Collect page
    • Multiple runs: make selection foreground white

eldix 1.5.0 - 18/02/2023

• gui.gui:
  • Write progress of data collection to image area
• gui.imgtk:
  • Draw progress into image area during data collection
• gui.image:
  • Add brightness and contrast sliders
• gui.gui:
  • Replace call to prgupdater to eldixmgr
• STEM.gui:
  • Add Move & Shoot button below Move Phi
  • Implement Ctrl+Left|Right for STEM images
    • Bug fix when using mouse in color slider

eldix 1.4.3 - 13/02/2023

• octagon.collect:
  • Fix endless loop at start of data collection checking for
• gui.imgtk:
  • Bug fix @ drawing images after resize
• gui.gui:
  • Keyboard shortcut changes for Save image, Save area Reset Colors, Integrate area, Refine center, Fit window Colors, Header, Follow, Rings, Keep colors, Keep view
    • STEM detector movement
• STEM.gui:
  • Bug fix in Colors when using mouse to redistribute colors

eldix 1.4.2 - 08/02/2023

• STEM.gui:
  • Verify that stem is in progress and disable buttons

eldix 1.4.1 - 06/02/2023

• octagon.collect:
  • Increase time to wait for emission current
  • Collect ebeam params for cbf header
    • Calculate threshold_energy from wavelength
• STEM.gui:
  • Don't pop up progress window when shooting STEM
• dectris.eiger2:
  • Write ebeam params into cbf header

eldix 1.4.0 - 26/01/2023

• ebeam.ebeam:
  • Replace all calls to caput by actget and actset
• STEM.gui:
  • Bug fix when manually selecting meshes
  • Support for alternative centers
  • Move DrawCross/Particles/Meshes to Data2Photo

eldix 1.3.3 - 25/01/2023

• ebeam.ebeam:
  • Set state=xxx... when sending change command
• STEM.gui:
  • Change cursor to watch when changing mode
  • Make sure that ebeam.io.state gets ... immediately
    • Disallow mouse while shooting stem

eldix 1.3.2 - 20/01/2023

• octagon.octagon:
  • Bug fix in motorhome for OCT:GONIO:X/Y

eldix 1.3.0 - 09/01/2023

• gui.gui:
  • Add F1->Fn as keyboard shortcuts for pages Image...

eldix 1.2.1 - 16/12/2022

• dectris.eiger2:
  • Rename VERSION to version
• octagon.gui:
  • Add Reset button to GUI and run actreset
• cfg:
  • Add geometry to global section
• main:
  • Allow geometry via cfg

eldix 1.2.0 - 12/12/2022

• STEM.gui:
  • Add Map button to Map page
    • Remove X... and Y... from MAP file names
  • Add GRIDn to MAP file names
  • Truncate mapmeshes|particles to #mesh|#part
    • Initialize self.mapmsg
    • Add self.map_dir

eldix 1.1.6 - 05/12/2022

• main:
  • Rename option --VERSION to --version
• dectris.eiger2:
  • Add audit.creationmethod 'Created by...' top cbf output
• octagon.collect:
  • Add mrc as output option. Don't run imgcvt if no conversion selected
    • Update current value for emission current
• gui.tooltip:
  • Place tooltip so it is outside button
• gui.gui:
  • Use different icons for eldiv, eldip, add icons to src/img

eldix 1.1.5 - 02/12/2022

• C/io/colors.c:
  • Bug fix in radial colors: always apply to R<20

eldix 1.1.4 - 25/11/2022

• STEM.gui:
  • Bug fix: select only particle closest to mouse x,y
• ebeam.ebeam:
  • Close and reopen sockets if there are too many read errors
  • Stop retry after approx. 1 hour
• octagon.gui:
  • When leaving program in transfer, come back to that point after restart

eldix 1.1.3 - 08/11/2022

• dectris/eiger2:
  • Change zmq poll timeout from 100 ms to infinite
• fileio.mar345:
  • Make sure that self.x/y are always integers
• gui.imgtk:
  • Correct xc,yc for 2-theta != 0.0
• mardtb.camera:
  • Add cv2.CAP_V4L2 as argument
• mardtb.mardtb:
  • Add method theta to DtbGet to convert steps into degrees
• mardtb.collect:
  • Check: max. frame rate for EIGER1 R4M is 5 Hz.
    • Set dphi in filewriter
• mardtb.gui:
  • Don't use Init@max for CHI/THETA
    • Always paint box in Align page

eldix 1.1.2 - 03/11/2022

• STEM.gui:
  • Shoot another STEM after recentering
    • Add option to take only STEM's, no diffraction
    • Bug fix: return to original position in grid/mesh when moving to next particle
• ebeam.cfg:
  • Add mapvogrid/fovmesh/fovparticle/meshes/particles
    • Use of distr.linuxdistribution()
    • Set all threads to daemon mode

eldix 1.1.1 - 31/10/2022

• main:
  • Add args to appcommon
    • Use of distr.linux_distribution()

eldix 1.1.0 - 18/10/2022

• STEM.gui:
  • Support particles and meshes in TIFF
    • Add "Map" to STEM pages
    • Support loading of png/jpg in display area
• gui.msgbox:
  • Change some colors
• gui.image:
  • Don't show refine center in marx, only eldix
• dectris.eiger2:
  • Bug fix: applyMasK only if pixel value is reasonable
• fileio.openimg:
  • Add magic number for sfrm
• fileio.imgsfrm:
  • Add support for read/write of sfrm (module from imgcvt 5.2)

eldix 1.0.2 - 06/10/2022

• main:
  • Allow --marx when running program directly from main.py
• mardtb.collect:
  • Handle resize events on main window

eldix 1.0.1 - 27/09/2022

• common.appcommon:
  • Add distro
• gui.gui:
  • Switch order of Octagon and STEM frame
• main:
  • Fill in Linux distribution into appcommon.distro Use this to adjust geometries of windows for Debian/Ubuntu The metrics of fonts is different between those! This affects the size of labels, textfields, LCD's

eldix 1.0.0 - 22/09/2022

• Replace main notebook by simple frames because of redundancy with toolbar buttons.
• Add resize handler OnSize to: gui.gui, octagon.gui, octagon.collect, ebeam.gui, STEM.gui, mardtb.gui, metaljet.gui, mar345.gui, process.process
• ebeam.cfg:
  • Add paramsets and default_set to section [ebeam]
• ebeam.gui:
  • Support of diffraction|stem1-5 when using paramsets>1
    • Change layout of items above ebeam pic

eldix 0.14.1 - 15/09/2022

• ebeam.cfg:
  • Add fovmenu to [stem]
• STEM.gui:
  • Use options from fovmenu with default 1st item

eldix 0.14.0 - 14/09/2022

• STEM.gui:
  • Add "Grid scan" to notebook options
  • Add 75 um to FoV choices
    • Disable "Single" and "Series" buttons when moving xyz
• octagon.collect:
  • Add grid scan to special options
• ebeam.gui:
  • Load and safe direct beam coordinates to ebeam.json
• ebeam.cfg:
  • Add items gridx,y,overlap and beamx,beam_y to [ebeam]
• gui.imgtk:
  • Save refined center values to ebeam.json
• gui.gui:
  • Also show File -> Xtal & Powder in imageviewer mode

eldix 0.13.5 - 08/09/2022

• octagon.gui:
  • Bug fix lcd_precision:if "Bright in t" -> "Bright"
  • Change layout of Lcd (similar to STEM.gui)
• STEM.gui:
  • Change size of STEM canvas

eldix 0.13.4 - 06/09/2022

• octagon.cfg:
  • Add y-lookup to section [octagon]
• octagon.octagon:
  
  • Add y-lookup corrections to PHI movements

eldix 0.13.3 - 01/09/2022

• gui.gui:
  • Add Refine Center button to imageviewer
  • Fix geometry for imageviewer only
• gui.image:
  • Add button Refine Center
• gui.imgtk:
  • Call peaks.directBeam when refining center
• gui.peaks:
  • Algorithm for directBeam
• gui.peaks:
  • Several algorithms tested for image scaling in center
• gui.imgtools:
  • Add Radial to image scaling options
• C/io/colors.c:
  • Add center to i32torgba
  • Implement radial scaling to get rid of directBeam
• STEM.gui:
  • Change colors of popup window from red to blue
• fileio/imgtif:
  • Read ImageDescription from tiff files, if present, and get header info from there

eldix 0.13.1 - 19/08/2022

• dectris.eiger2:
  • Bug fix implemented in 0.12.3 has disappeared in 0.13.0! Put it back

eldix 0.13.0 - 18/08/2022

• gui.gui:
  • For QUADRO/ELA: no humidity/temperature in statusbar
• gui.image:
  • Use gif instead of png for bitmaps (MacOS compatibility)
• process.process:
  • Use gif instead of png for bitmaps (MacOS compatibility)
• dectris.eiger2:
  • Catch exception when eigerinit is not in binary path
• STEM.gui:
  • Draw circles around center of STEM grid
    • Add Save button and option to save particle coordinates
    • Change order of motors to PHI,Z,X,Y,GONIO:X
    • Group X,Y and separate from Z

eldix 0.12.3 - 11/08/2022

• dectris.eiger2:
  • Bug fix when using short exposure times < 0.5s: image output must NOT run on its own thread, but on main
• octagon.collect:
  • Bug fix: exposure time is not a list, but single float

eldix 0.12.2 - 22/07/2022

• octagon.collect:
  • Bug fix: special options pause must not be applied to single

eldix 0.12.1 - 20/07/2022

• dectris.rest:
  • Bug fix for last block in paused data collection

eldix 0.12.0 - 18/07/2022

• octagon.collect:
  • Special options: pause for x secs after n frames
  • Read/Write .local/share/ELDICO/eldix/collect.json
• dectris.rest:
  • Pause data collection for x secs after n frames
• fileio.fops:
  • Pass pausing params to dectris.rest

eldix 0.11.2 - 14/07/2022

• fileio.imgcbf:
  • Parsing of Pixel_size in cbf header made less errorprone
• dectris.eiger2:
  
  • Call eigerinit with shell=False and with args -p portno

eldix 0.11.1 - 12/07/2022

• STEM.gui:
  • Calculate delta-z as tangens, not sin/cos
  • Verify that dz is calculated correctly for PHI != 0
  • Don't accept mouse input in image area during runmode change
• gui.imgtk:
  • Bug fix: return without error message after successfully loading spot file
• process.integrate:
  • Bug fix in PlotLog: move prc.communicate to try/except
• process.scale:
  • Bug fix in PlotLog: move prc.communicate to try/except

eldix 0.11.0 - 07/07/2022

• main:
  • Add option --pilatus
• fileio.fops:
  • Add pilatus support
• dectris.eiger2:
  • Do not import cbf from pypi but use library libcbfcompress This is due to difficulties to install cbf via pip
  • Call eigerinit at initializatio
• common.license:
  • Add module to generate and verify a license key
• cfg:
  • Add license to global section
• gui.gui:
  • Add license verification
  • Get humidity and temperature from PILATUS detector
• mardtb.mardtb:
  • Add license key mechanism for program marx

eldix 0.10.4 - 28/06/2022

• octagon.gui:
  • Remove STEM tab during data collection
  • Switch to Image page after 1st image

eldix 0.10.3 - 27/06/2022

• STEM.gui:
  • Bug fix: wait for stem... to finish before accepting mouse

eldix 0.10.2 - 03/06/2022

• cfg:
  • Add forceh5 to section detector
• dectris.rest:
  • Implement forceh5
• fileio.fops:
  • Implement forceh5

eldix 0.10.1 - 02/06/2022

• octagon.collect:
  • Don't correct ffrm / lfrm, just paint red
• octagon.collect:
  • Use data collection directory for saving last STEM, add timeout of 3.0 for PHI movement
• STEM.gui:
  • Load last STEM from data collection
    • Bug fix when shooting diffraction image

eldix 0.10.0 - 01/06/2022

• cfg:
  • Add pixelmask and flatfield to section [detector]
• main:
  • Load pixelmask and flatfield when configured
• dectris.eiger2:
  • Apply pixelmask and flatfield when configured
• gui.gui:
  • Color scheme of progressbar changed
• octagon.collect:
  • Option to take STEM after end of data collection
• STEM.gui:
  • Option to take detector frame after single STEM

eldix 0.9.1 - 24/05/2022

• gui.gui:
  • Bug fix: appcommon.stemwin => appcommon.mainwin.stemwin
• STEM.gui:
  • Bug fix: Menu STEM->Open did load next, but should open file chooser dialog
• octagon.collect:
  • When creating new project, reset stem directory to ~/data/stem

eldix 0.9.0 - 09/05/2022

• octagon.collect:
  • Single image = still image, no delta-phi
    • Rename Directory & names - > Project settings
    • Rename Image directory -> Project directory
    • Rename Name template -> Project name
    • Move image range to Data collection settings
    • Add "Convert frames into" o/p-formats to Directory & name
    • Show only one STOP button
    • Autoincrement single images
    • Use imgcvt for all conversion
    • Don't use conversion on stills
    • STEM's will be moved to a subdirectory of the current data collection directory after completed
    • A run number (rundigits) will be appended automatically to the project name when collecting data. The subdirectory will be created automatically.
• cfg:
  • Add filedigits, rundigits to section [image]

eldix 0.8.2 - 06/05/2022

• STEM.gui:
  • Left mouse click: shoot STEM after XYZ
  • Right mouse click in STEM: don't shoot STEM after moving XY
  • Add some instructions underneath canvas
  • At PHI=0: only move SAMPLE:X, GONIO:X
  • At PHI!=0: only move SAMPLE:Z

eldix 0.8.1 - 05/05/2022

• octagon.collect:
  • Collect entire series would call single on 2nd call
• ebeam.cfg:
  • datadir renamed to datasubdir
• STEM.gui:
  • After Move xy|z, shoot next STEM

eldix 0.8.0 - 22/04/2022

• octagon.collect:
  • Emission current increment: 10.0->1.0
• ebeam.cfg:
  • Add datadir in section stem
• STEM.gui:
  • Only move x,y at phi=0 / only z at phi!=0

eldix 0.7.4 - 22/04/2022

• STEM.gui:
  • Prealign: when calling sleep, use fabs(dphi), not dphi Replace octagon.stem by STEM.gui

eldix 0.7.3 - 20/04/2022

• STEM.gui:
  • Disable Single/Series as soons as changing state
    • Check ACT:POS in TabStateTimer

eldix 0.7.2 - 19/04/2022

• octagon.collect:
  • En/disable collect buttons while changing runmode
    • Drive actuator out of the way
• STEM.gui:
  • Add TabStateTimer: change states diffraction/stem when changing tabs
• ebeam.ebeam:
  • Don't move BF out for state!=stem

eldix 0.7.0 - 04/04/2022

• octagon.camera:
  • Adjust naming conventions
    • Show tab "Motors" default
    • motorvars: single precision
    • Center: invert dy = yorg-y, multiply by 1000
• STEM.gui:
  • Make uise of program stemget to obtain STEM's
• gui.imgtk:
  • In NextImg refresh file list when directory changes

eldix 0.6.0 - 04/04/2022

• gui.imgtk:
  • Apply selected colorscheme to subsequent images
• ebeam.ebeam:
  • Stop time it takes to generate a STEM image
• ebeam.cfg:
  • Add emissionstabilizationtime with default 5000 ms
• octagon.collect:
  • Apply emissionstabilizationtime
• octagon.collect:
  • Increment emission_current in units of 2.0 not 10.0
• STEM.gui:
  • Error handling when Brightfield sits at 0 and does not move when starting a STEM

eldix 0.5.5 - 28/03/2022

• mardtb.collect:
  • Bug fix when starting multiple runs without defining ranges Print PHI for each image
• mardtb.gui:
  • Update dots when changing ranges for Optimize
• gui.gui:
  • Add img/128/....activate.mar.png when running mar programs

eldix 0.5.4 - 25/03/2022

• octagon.collect:
  • Check if DPHI/TIME exceeds rotation speed limits

eldix 0.5.3 - 22/03/2022

• octagon.collect:
  • Split octagon.cfg['convert'] into words. You may now give keyword "convert=eldixcvt -s" in ~/.octagon.cfg

eldix 0.5.2 - 21/03/2022

• octagon.octagon:
  • Check if PHI >= 0. before homing
    • Do not ask REF_STAT for GONIO:Y in last step

eldix 0.5.1 - 18/03/2022

• STEM.gui:
  • Choices for PHI-Interval modified
    • Choices for PHI @ start modified
    • LCD precision 1->2 for motors except PHI
    • Use AskWindow instead of msgbox3, fix multiple windows popping up in manual pick mode

eldix 0.5.0 - 17/03/2022

• gui.gui:
  • Add message area to statusbar,show all messages from log file
    • Use fixed fonts for resol & xy in statusbar
• gui.imgtk:
  • Calc of resolution rings from canvas width, not image size
• STEM.gui:
  • Bug fix left/right mouse button: really use previous/next
    • Use right mouse button to ignore STEM in manual pick
    • Set buttons to state normal when reconfiguring
• octagon.collect:
  • Replace Run -> Collect single / Collect series
    • Autoincrement ffrm in Collect single mode

eldix 0.4.0 - 14/03/2022

• STEM.gui:
  • Bug fix when clicking into STEM if Offset: do not drive to coordinates but update x,y-offsets
• STEM.gui:
  • Small layout changes in STEM->Series
• octagon.octagon:
  • Home motors after transfer except GONIO:Y
• octagon.gui:
  • Home motors after transfer except GONIO:Y
• octagon.collect:
  • Replace Image range by First/last image

eldix 0.3.0 - 18/02/2022

• octagon.stem.py:
  • Renamed to STEM/gui.py -> main page in GUI
  • Page "Simple" merged with "Series"
  • Return PHI to 0 at end of series
  • Solid background option for overlays
  • Rename STEM to ED####.[S###.##].FOVxx.PHIxxx.tiff
• octagon.collect:
  • Add emission current to data collection parameters
• gui.gui:
  • Add pop-up window to status of emission current to set it
  • Add bmaptbactive and use for active pages
• gui.imgtk:
  • Bug fix memory function
• fileio.imgcbf:
  • Bug fix: CBF file not closing. After 1024 opened files no more files can be opened. Bug was in mario.c
• process...:
  • Always catch stderr on subprocess
  • Move self.after(1000, self.printQueue) to main thread!
• process.index:
  • Bug fix at end of indexing with dials: change Run buttons

eldix 0.2.3 - 15/02/2022

• octagon.stem:
  • Also apply x,y-offsets to Simple/Pre/Series
• octagon.collect:
  • Check ebeam in diffraction at start of data collection
• process.setup:
  • Remove scrollbars

eldix 0.2.2 - 08/02/2022

• octagon.stem:
  • Grid coordinates: center is 0,0 and y up is positive
  • Fix DrawCross: divide by 400
  • Adjust color scheme overlays
  • Add function DrawMeta
  • Changes to offset calculation according to Robert Rosen
• octagon.octagon:
  • Add 'simulator' to cfg, add functions actget/actset, change homing routines: wait for motors to finish
• octagon.collect:
  • Move bf detector out of the way at start of data coll.

eldix 0.2.1 - 03/02/2022

• octagon.stem:
  • Manual mode for picking x,y
• octagon.gui:
  • Save motor positions to eldix.motors.json
  • Change name of motors and check that lcd areas are updated
• octagon.collect:
  • Return phi to 0 at end of data collection
• ebeam.gui:
  • Add arrows and set button to emission current
• ebeam.ebeam:
  • Check if we got any STEM data at all on stemcapture
• gui.msgbox3:
  • Bug fix: button3 returned same as button2
• gui.tooltip:
  • Don't create event on Leave parent: too much flickering

eldix 0.2.0 - 25/01/2022

• main:
  • Add metaljet
• gui.gui:
  • Add metaljet page
• cfg:
  • Add maketoken, checktoken for jwt, add logger to function
• cmdsrv:
  • Add metaljet
• mardtb.gui:
  • Fix optimize (sign of rothor), add params to Put/GetJson

eldix 0.1.1 - 09/12/2021

• octagon.camera:
  • Fix LED On/Off
  • Bug fixes when dealing with USB instead of TIS
  • Keep aspect ratio when zooming in

eldix 0.1.0 - 06/12/2021

• gui:
  • Add most kv/vacuum/current/phi to left hand side toolbar
  • Add delay options for delay in view menu
• ebeam.gui:
  • Add history plots to kv/current/power/vacuum
  • Safe only selection of user settings to json
• octagon.stem:
  • Add "Offset" tab
• gui.collect:
  • Run 'convert' program at end of data collection
  • Don't update textfield PHI at end of data collection
  • Option to drive PHI back to where it came from
  • Check existence of directory before driving PHI
• cfg:
  • Add convert to image section

eldix 0.0.15 - 11/10/2021

• octagon:stem:
  • Fix grid to show actual fov

eldix 0.0.14 - 15/11/2021

• octagon.stem:
  • Add yscale to u2ma
  • Add prealign tab
• octagon.gui:
  • ACT:POS movement toggles between position_in/out
• octagon:
  • Function motorxfer: drive all motors to transfer position
• octagon.cfg:
  • Add transfer to octagon motor params (as mounting position)
• ebeam.gui:
  • Use LCD instead of gauges
• gui.collect:
  • Operate beam blanking automatically

eldix 0.0.13 - 04/10/2021

• octagon.stem:
  • Add series tab
• octagon.camera:
  • Add LED ON/OFF
• ebeam.gui:
  • Add generatoremissioncurrent
• cfg:
  • Add chi to image section

eldix 0.0.12 - 11/10/2021

• octagon.gui:
  • Clean up motor handling
• ebeam.stem:
  • Move to octagon.stem
  • Add TIFF to stem output
• octagon.gui:
  • Rename SAMPLE:X to Z and SAMPLE:Y to X
• main:
  • Fix stdin loop when not running from tty
• gui.collect:
  • Add tiff16/32 to supported formats
• cfg:
  • Add center_x/y to image section

eldix 0.0.11 - 11/10/2021

• ebeam.stem:
  • blank_timeout added
• ebeam.gui:
  • Load user settings from json
• cfg:
  • Add wavelength,distance to image section
• octagon.cfg:
  • Add position_in/out

eldix 0.0.10 - 08/10/2021

• ebeam:stem:
  • um2ma and fov added to config

eldix 0.0.9 - 29/09/2021

• ebeam:stem:
  • Numerous changes to comply with current E-beam API

eldix 0.0.8 - 01/09/2021

• process:
  • Numerous bug fixes
• cmdsrv:
  • Add TcpClient
• gui.gui:
  • Add Process menu

eldix 0.0.7 - 29/08/2021

• image:
  • Bug fixes when loading series of images

eldix 0.0.6 - 17/06/2021

• **Structure of project changed, changes in setup
• octagon.camera:
  • Centering strategy
• main:
  • optparse replace by argparse, mar345 support added

eldix 0.0.5 - 28/04/2021

• collect:
  • Bug fixes in TIFF support for Dectris images
• main:
  • Add upgrade option to help menu

eldix 0.0.4 - 26/04/2021

• gui.image:
  • Bug fixes in image display
• gui.camera:
  • Add TIS camera support
• ebeam.stem:
  • conversion of microns into mAmps

eldix 0.0.3 - 13/04/2021

• Windows compatibility

eldix 0.0.2 - 16/12/2020

• auth:
  • User management added
• cfg:
  • Add [auth] and [camera] sections
• main:
  • Add logging
• gui.camera:
  • Add camera support

eldix 0.0.1 - 09/12/2020

• First working release: